Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase family protein | PLIM_RS19515 | Q44507 | - | 4874813 - 4875964 | 41487.1 |
| alpha/beta hydrolase | PLIM_RS19520 | Q7M370 | - | 4876087 - 4876989 | 32257.4 |
| duf1080 domain-containing protein | PLIM_RS19525 | Not Available | + | 4877409 - 4878182 | 28202.6 |
| hypothetical protein | PLIM_RS19530 | Not Available | + | 4878368 - 4879381 | 36863.6 |
| hypothetical protein | PLIM_RS19535 | Not Available | + | 4879378 - 4880382 | 37209.2 |
| uxaa family hydrolase | PLIM_RS19540 | O34673 | - | 4880567 - 4882093 | 53845.2 |
| peptidase t | PLIM_RS19545 | B7LQ18 | - | 4882205 - 4883473 | 45304.4 |
| thioredoxin domain-containing protein | PLIM_RS24620 | Q96419 | + | 4883841 - 4886147 | 81139.0 |
| hypothetical protein | PLIM_RS19555 | Not Available | + | 4886543 - 4886869 | 11800.7 |
| type iii plp-dependent enzyme | PLIM_RS19560 | O50657 | + | 4887301 - 4888479 | 42330.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.