Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS19455 | Not Available | + | 4862471 - 4862803 | 12522.8 |
| rna polymerase sigma factor | PLIM_RS19465 | Not Available | + | 4863278 - 4863874 | 22708.1 |
| hypothetical protein | PLIM_RS19475 | Not Available | + | 4864461 - 4865693 | 45477.2 |
| metallophosphoesterase family protein | PLIM_RS19480 | Not Available | + | 4865853 - 4867829 | 73280.8 |
| flotillin-like protein floa | PLIM_RS19485 | Q7UQJ2 | + | 4868252 - 4869193 | 33482.7 |
| biosynthetic arginine decarboxylase | PLIM_RS19490 | Q9RXR4 | + | 4869303 - 4871213 | 71949.2 |
| hydrogen peroxide-dependent heme synthase | PLIM_RS19495 | A7GVD5 | + | 4871410 - 4872249 | 31910.1 |
| udp-glucuronic acid decarboxylase family protein | PLIM_RS19500 | Q8NBZ7 | + | 4872456 - 4873397 | 34946.1 |
| hypothetical protein | PLIM_RS19505 | Not Available | - | 4873422 - 4873739 | 11299.8 |
| rraa family protein | PLIM_RS19510 | Not Available | + | 4874079 - 4874810 | 25778.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.