Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lptf/lptg family permease | PLIM_RS01665 | Not Available | + | 404657 - 405778 | 40440.9 |
| Trna-asp | Not Available | Not Available | + | 406032 - 406105 | Not Available |
| hypothetical protein | PLIM_RS01675 | Not Available | - | 406262 - 406651 | 14028.5 |
| hypothetical protein | PLIM_RS23965 | Not Available | - | 406645 - 407052 | 14442.7 |
| helix-turn-helix transcriptional regulator | PLIM_RS23530 | Not Available | - | 407220 - 407717 | 18371.8 |
| duf423 domain-containing protein | PLIM_RS01690 | Q8CTQ5 | - | 407949 - 408428 | 16898.6 |
| right-handed parallel beta-helix repeat-containing protein | PLIM_RS01695 | Not Available | + | 408700 - 410106 | 52521.1 |
| dj-1/pfpi family protein | PLIM_RS01700 | Q9M8R4 | - | 410141 - 410731 | 21468.8 |
| (d)cmp kinase | PLIM_RS01705 | Q7UEW6 | - | 410761 - 411444 | 24926.8 |
| xaa-pro peptidase family protein | PLIM_RS01710 | O84913 | - | 411574 - 412755 | 43579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.