Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | PLIM_RS23290 | Q2RWU7 | + | 4847148 - 4848944 | 66433.7 |
| yjhg/yagf family d-xylonate dehydratase | PLIM_RS19400 | P77596 | + | 4849117 - 4851213 | 73296.1 |
| c-type cytochrome | PLIM_RS19405 | P55496 | + | 4851242 - 4852840 | 59165.7 |
| alpha/beta fold hydrolase | PLIM_RS19410 | Not Available | + | 4852968 - 4854149 | 43153.9 |
| complex i subunit 5 family protein | PLIM_RS19415 | P29388 | - | 4854432 - 4855865 | 52129.7 |
| helix-turn-helix transcriptional regulator | PLIM_RS19420 | Not Available | - | 4855999 - 4856355 | 13639.8 |
| wg repeat-containing protein | PLIM_RS19430 | Not Available | + | 4857029 - 4857994 | 35555.6 |
| pectate lyase | PLIM_RS19435 | Not Available | + | 4858264 - 4859316 | 39552.9 |
| sialidase family protein | PLIM_RS19440 | Not Available | - | 4859349 - 4861820 | 92033.4 |
| hypothetical protein | PLIM_RS19450 | Not Available | + | 4862136 - 4862429 | 10564.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.