Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | PLIM_RS19345 | Not Available | - | 4836641 - 4837156 | 18757.9 |
| biopolymer transporter exbd | PLIM_RS19350 | Not Available | - | 4837158 - 4837613 | 16695.2 |
| mota/tolq/exbb proton channel family protein | PLIM_RS19355 | Not Available | - | 4837690 - 4838496 | 28912.5 |
| sensor histidine kinase | PLIM_RS23285 | P54663 | + | 4838681 - 4839865 | 44152.6 |
| response regulator | PLIM_RS19365 | O32197 | + | 4839840 - 4840493 | 23864.2 |
| gfo/idh/moca family protein | PLIM_RS19370 | O13991 | - | 4840614 - 4842170 | 56843.7 |
| doxx family protein | PLIM_RS19375 | Not Available | - | 4842336 - 4843550 | 45821.0 |
| fad:protein fmn transferase | PLIM_RS19380 | B5XRA9 | - | 4843796 - 4844884 | 38641.3 |
| hypothetical protein | PLIM_RS19385 | Not Available | + | 4845703 - 4846020 | 10876.7 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | PLIM_RS19390 | Q60AK7 | + | 4846081 - 4847067 | 36679.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.