Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kpsf/gutq family sugar-phosphate isomerase | PLIM_RS19235 | O67500 | - | 4809755 - 4810930 | 41538.8 |
| duf4350 domain-containing protein | PLIM_RS19240 | Not Available | - | 4811209 - 4812465 | 46410.5 |
| duf4129 domain-containing protein | PLIM_RS19245 | Not Available | - | 4812462 - 4814378 | 69183.7 |
| stage ii sporulation protein m | PLIM_RS19250 | Not Available | - | 4814375 - 4815373 | 37341.9 |
| rdd family protein | PLIM_RS23280 | Not Available | - | 4815370 - 4816209 | 30924.4 |
| hypothetical protein | PLIM_RS19260 | Not Available | - | 4816423 - 4817232 | 28839.2 |
| adenosylmethionine decarboxylase | PLIM_RS19265 | A6VHH1 | + | 4818007 - 4818435 | 15692.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PLIM_RS19270 | P44760 | + | 4818679 - 4819179 | 17766.6 |
| sulp family inorganic anion transporter | PLIM_RS19280 | O06984 | + | 4820169 - 4821968 | 64023.0 |
| abc transporter atp-binding protein | PLIM_RS19285 | P22040 | + | 4822398 - 4823330 | 34602.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.