Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS19010 | Not Available | + | 4757327 - 4757731 | 14959.9 |
| hypothetical protein | PLIM_RS19015 | Not Available | + | 4757771 - 4758178 | 15572.6 |
| rlua family pseudouridine synthase | PLIM_RS19025 | O50310 | - | 4758343 - 4759380 | 39717.5 |
| hypothetical protein | PLIM_RS19030 | Not Available | - | 4759589 - 4760575 | 34692.8 |
| duf3500 domain-containing protein | PLIM_RS19035 | Not Available | - | 4760835 - 4761899 | 39215.5 |
| sugar phosphate isomerase/epimerase | PLIM_RS19040 | Q9KAH2 | + | 4762301 - 4763242 | 33994.9 |
| atp-binding protein | PLIM_RS19045 | Not Available | + | 4763381 - 4764394 | 38228.9 |
| hypothetical protein | PLIM_RS19050 | Not Available | + | 4764624 - 4765049 | 15193.6 |
| hypothetical protein | PLIM_RS19055 | Not Available | + | 4765134 - 4765433 | 10452.5 |
| hypothetical protein | PLIM_RS19060 | Not Available | + | 4765643 - 4766812 | 44793.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.