Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS18955 | Not Available | - | 4743445 - 4744497 | 37670.7 |
| secretin n-terminal domain-containing protein | PLIM_RS18960 | P45758 | - | 4744552 - 4748889 | 155476.0 |
| m3 family metallopeptidase | PLIM_RS18970 | Q94AM1 | + | 4749311 - 4751395 | 79071.4 |
| ycei family protein | PLIM_RS18975 | B1J2Y3 | - | 4751551 - 4752123 | 20057.0 |
| hypothetical protein | PLIM_RS18980 | Not Available | + | 4752442 - 4752708 | 9874.04 |
| sigma-54-dependent fis family transcriptional regulator | PLIM_RS18985 | P37344 | - | 4752756 - 4754144 | 51376.9 |
| arsr family transcriptional regulator | PLIM_RS18990 | Not Available | - | 4754195 - 4754557 | 13398.2 |
| sodium-dependent bicarbonate transport family permease | PLIM_RS18995 | Not Available | + | 4754815 - 4755822 | 35223.2 |
| p-ii family nitrogen regulator | PLIM_RS19000 | Not Available | + | 4755999 - 4756301 | 11001.5 |
| carbonic anhydrase | PLIM_RS19005 | Not Available | + | 4756294 - 4757049 | 26913.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.