Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | PLIM_RS18905 | Q92UV7 | - | 4728928 - 4730370 | 51664.4 |
| hypothetical protein | PLIM_RS18910 | Not Available | - | 4730398 - 4731126 | 28277.8 |
| lactonase family protein | PLIM_RS18915 | O34499 | - | 4731466 - 4732704 | 43559.6 |
| trna-dihydrouridine synthase | PLIM_RS18920 | P37567 | - | 4732789 - 4733757 | 34972.2 |
| prenyltransferase/squalene oxidase repeat-containing protein | PLIM_RS18925 | Not Available | - | 4733769 - 4734767 | 35705.4 |
| flagellar hook-basal body complex protein | PLIM_RS18930 | Q44767 | - | 4735336 - 4737024 | 58053.7 |
| had-iib family hydrolase | PLIM_RS18935 | P31928 | + | 4737462 - 4739714 | 84365.4 |
| amylosucrase | PLIM_RS18940 | Q9ZEU2 | + | 4739781 - 4741772 | 75915.6 |
| gnat family n-acetyltransferase | PLIM_RS18945 | Not Available | + | 4741818 - 4742339 | 19383.5 |
| terc family protein | PLIM_RS18950 | P0AEC2 | - | 4742424 - 4743176 | 27295.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.