Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbon storage regulator csra | PLIM_RS01605 | Q7UG38 | + | 393769 - 393966 | 7457.99 |
| adenylyl-sulfate kinase | PLIM_RS01615 | A1U3X8 | - | 394667 - 395278 | 22499.7 |
| pspa/im30 family protein | PLIM_RS22240 | Not Available | - | 395803 - 396348 | 20186.8 |
| rna polymerase sigma factor | PLIM_RS01630 | A0R2D4 | - | 396621 - 397259 | 24455.1 |
| lactate racemase domain-containing protein | PLIM_RS01635 | Not Available | + | 397595 - 398863 | 45608.4 |
| hypothetical protein | PLIM_RS01640 | Not Available | + | 398912 - 399355 | 15920.6 |
| mfs transporter | PLIM_RS01645 | P71369 | - | 399422 - 400912 | 54262.6 |
| 3-isopropylmalate dehydratase small subunit | PLIM_RS01650 | P74207 | - | 401421 - 402032 | 22007.3 |
| uma2 family endonuclease | PLIM_RS01655 | Not Available | - | 402139 - 402747 | 22805.7 |
| 3-isopropylmalate dehydratase large subunit | PLIM_RS01660 | B7KH96 | - | 402845 - 404251 | 50853.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.