Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mosc domain-containing protein | PLIM_RS18800 | O34542 | + | 4704045 - 4704710 | 24736.7 |
| beta-ketoacyl synthase | PLIM_RS18805 | P16538 | - | 4704705 - 4706024 | 46727.8 |
| abc transporter permease | PLIM_RS18810 | Not Available | + | 4706312 - 4707700 | 49781.7 |
| hypothetical protein | PLIM_RS18815 | Not Available | - | 4708282 - 4708782 | 17685.3 |
| sulfatase | PLIM_RS18825 | Q32KJ8 | + | 4709524 - 4711437 | 70072.1 |
| class i sam-dependent methyltransferase | PLIM_RS18830 | Not Available | - | 4711990 - 4712778 | 29584.4 |
| s9 family peptidase | PLIM_RS18835 | Not Available | - | 4712903 - 4714912 | 74944.1 |
| zinc ribbon domain-containing protein | PLIM_RS18840 | Not Available | - | 4714974 - 4715252 | 10943.7 |
| glycerophosphodiester phosphodiesterase | PLIM_RS18845 | O07592 | - | 4715366 - 4716232 | 31651.0 |
| inorganic diphosphatase | PLIM_RS18850 | Q949J1 | - | 4716322 - 4716873 | 21040.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.