Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein i/j | PLIM_RS18690 | Not Available | + | 4678204 - 4678818 | 21031.1 |
| type ii secretion system protein gspj | PLIM_RS18695 | Not Available | + | 4678815 - 4679756 | 33450.3 |
| general secretion pathway protein gspk | PLIM_RS23260 | Not Available | + | 4679753 - 4681513 | 64079.4 |
| hypothetical protein | PLIM_RS24615 | Not Available | - | 4681575 - 4681904 | 12383.9 |
| arylsulfatase | PLIM_RS18710 | Not Available | + | 4681938 - 4683500 | 57008.5 |
| transposase | PLIM_RS18715 | Not Available | - | 4683633 - 4684154 | 20091.6 |
| metabolite traffic protein eboe | PLIM_RS18720 | Not Available | - | 4684299 - 4685477 | 43601.3 |
| dmt family transporter | PLIM_RS18725 | Not Available | - | 4685608 - 4686624 | 36246.2 |
| type ii toxin-antitoxin system higa family antitoxin | PLIM_RS18730 | Not Available | - | 4686916 - 4687347 | 15998.2 |
| voc family protein | PLIM_RS18740 | Not Available | + | 4687558 - 4687941 | 13502.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.