Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vcbs repeat-containing protein | PLIM_RS18640 | Not Available | - | 4664341 - 4666752 | 87017.9 |
| hypothetical protein | PLIM_RS24460 | Not Available | - | 4666927 - 4667082 | 5397.32 |
| fha domain-containing protein | PLIM_RS23255 | Not Available | + | 4667196 - 4667864 | 24630.6 |
| hypothetical protein | PLIM_RS18655 | Not Available | - | 4668398 - 4668601 | 6798.97 |
| sugar phosphate isomerase/epimerase | PLIM_RS18660 | Not Available | - | 4670022 - 4670849 | 30425.4 |
| tatd family hydrolase | PLIM_RS18665 | P37545 | - | 4670989 - 4671777 | 29441.3 |
| thiazole synthase | PLIM_RS18670 | Q7US84 | + | 4672311 - 4673156 | 29906.1 |
| aaa family atpase | PLIM_RS18675 | Not Available | + | 4673226 - 4674248 | 38290.8 |
| bata domain-containing protein | PLIM_RS18680 | Not Available | + | 4674431 - 4676908 | 90769.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PLIM_RS18685 | Not Available | + | 4677422 - 4678186 | 27281.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.