Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| immunity 50 family protein | PLIM_RS25095 | Not Available | + | 4653600 - 4653995 | 15058.3 |
| trna adenosine(34) deaminase tada | PLIM_RS18590 | Q99W51 | - | 4654143 - 4654622 | 17849.5 |
| do family serine endopeptidase | PLIM_RS18595 | Q9PL97 | - | 4654986 - 4656473 | 51695.0 |
| duf1559 domain-containing protein | PLIM_RS18605 | Not Available | + | 4657042 - 4658055 | 36428.3 |
| (fe-s)-binding protein | PLIM_RS18610 | Q9KBU2 | + | 4658226 - 4658999 | 28502.8 |
| lactate utilization protein b | PLIM_RS18615 | Q8ET91 | + | 4659086 - 4660483 | 52396.6 |
| endonuclease/exonuclease/phosphatase family protein | PLIM_RS23250 | Not Available | + | 4660702 - 4661553 | 32463.6 |
| hypothetical protein | PLIM_RS18625 | Not Available | + | 4661531 - 4661935 | 14736.6 |
| sugar phosphate isomerase/epimerase | PLIM_RS18630 | Not Available | + | 4662026 - 4663042 | 36965.5 |
| phosphonoacetaldehyde hydrolase | PLIM_RS18635 | A0LJ16 | + | 4663279 - 4664088 | 29464.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.