Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | PLIM_RS18535 | Not Available | + | 4642413 - 4643315 | 33529.3 |
| atp-binding cassette domain-containing protein | PLIM_RS18540 | Not Available | + | 4643403 - 4644293 | 31493.5 |
| n-acetyltransferase | PLIM_RS18545 | Not Available | + | 4644326 - 4644814 | 18513.0 |
| hypothetical protein | PLIM_RS24610 | Not Available | + | 4644801 - 4645244 | 16255.3 |
| terminase large subunit domain-containing protein | PLIM_RS18555 | Not Available | + | 4645153 - 4646751 | 59545.5 |
| nuclease-related domain-containing protein | PLIM_RS18560 | Q8KYT4 | + | 4647090 - 4647776 | 26540.8 |
| anti-phage dctp deaminase | PLIM_RS18565 | Not Available | - | 4648244 - 4649755 | 56138.2 |
| adenosylhomocysteinase | PLIM_RS18570 | P10819 | - | 4649928 - 4651280 | 49423.5 |
| cina family nicotinamide mononucleotide deamidase-related protein | PLIM_RS18575 | B9MQY2 | + | 4651576 - 4652826 | 45127.6 |
| ankyrin repeat domain-containing protein | PLIM_RS18580 | Not Available | + | 4652978 - 4653463 | 17943.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.