Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fatty acid coa ligase family protein | PLIM_RS18485 | B2FI28 | - | 4631420 - 4633114 | 61709.0 |
| dephospho-coa kinase | PLIM_RS23245 | Q8EPE7 | + | 4633707 - 4634633 | 33667.1 |
| transcription termination factor rho | PLIM_RS18495 | Q7UGV0 | + | 4634630 - 4636192 | 58467.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | PLIM_RS18500 | A4J6A4 | + | 4636301 - 4636780 | 17126.8 |
| transcription antitermination factor nusb | PLIM_RS18505 | Q7USA9 | + | 4637014 - 4637505 | 18205.7 |
| phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i | PLIM_RS18510 | Not Available | + | 4637796 - 4639196 | 51127.1 |
| hypothetical protein | PLIM_RS18515 | Not Available | + | 4639750 - 4640052 | 10868.8 |
| hypothetical protein | PLIM_RS18520 | Not Available | + | 4640147 - 4640578 | 15884.3 |
| hypothetical protein | PLIM_RS18525 | Not Available | + | 4640623 - 4641201 | 20814.3 |
| c1 family peptidase | PLIM_RS18530 | Not Available | + | 4641524 - 4642336 | 29878.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.