Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme family protein | PLIM_RS18375 | V9TSX0 | - | 4603948 - 4606254 | 84829.8 |
| fasciclin domain-containing protein | PLIM_RS18385 | Not Available | + | 4607007 - 4607492 | 16590.4 |
| rna polymerase sigma factor | PLIM_RS18390 | Not Available | + | 4607581 - 4608147 | 21028.4 |
| anti-sigma factor | PLIM_RS18395 | Not Available | + | 4608192 - 4608938 | 27703.2 |
| hypothetical protein | PLIM_RS18400 | Not Available | - | 4609807 - 4610124 | 11889.3 |
| hypothetical protein | PLIM_RS18405 | Not Available | - | 4610338 - 4611366 | 38061.3 |
| dtdp-glucose 4,6-dehydratase | PLIM_RS18410 | P55294 | - | 4611404 - 4612432 | 38080.4 |
| hpf/raia family ribosome-associated protein | PLIM_RS18420 | Not Available | + | 4613104 - 4613457 | 13407.3 |
| heat repeat domain-containing protein | PLIM_RS18425 | Not Available | - | 4613730 - 4614662 | 32108.9 |
| hsp70 family protein | PLIM_RS18430 | B9LUC7 | + | 4615356 - 4616933 | 57400.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.