Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS01540 | Not Available | + | 380360 - 381256 | 33301.2 |
| hypothetical protein | PLIM_RS01545 | Not Available | + | 381572 - 381862 | 11728.9 |
| Trna-arg | Not Available | Not Available | + | 382225 - 382298 | Not Available |
| duf1559 domain-containing protein | PLIM_RS01565 | Not Available | - | 382946 - 384079 | 39848.7 |
| type vi secretion protein impb | PLIM_RS01580 | Q2RJ46 | + | 384970 - 386175 | 45071.6 |
| duf4159 domain-containing protein | PLIM_RS01585 | Not Available | - | 386228 - 388711 | 90930.2 |
| hypothetical protein | PLIM_RS23960 | Not Available | - | 388775 - 389113 | 12538.2 |
| cofactor-independent phosphoglycerate mutase | PLIM_RS01590 | A0B6L2 | + | 389269 - 390477 | 43390.7 |
| m14 family zinc carboxypeptidase | PLIM_RS01595 | Not Available | - | 390541 - 393165 | 96090.0 |
| hypothetical protein | PLIM_RS24880 | Not Available | + | 393292 - 393420 | 4634.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.