Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS18320 | Not Available | + | 4588107 - 4589918 | 65795.7 |
| hypothetical protein | PLIM_RS18325 | Not Available | + | 4589975 - 4590925 | 35572.7 |
| glycosyltransferase family 2 protein | PLIM_RS18330 | Not Available | + | 4591268 - 4591975 | 26250.5 |
| glycosyltransferase | PLIM_RS18335 | Not Available | + | 4591966 - 4592991 | 37888.8 |
| atp-binding protein | PLIM_RS18340 | P94604 | + | 4593406 - 4594383 | 36242.7 |
| si-specific nad(p)(+) transhydrogenase | PLIM_RS18345 | A4WG49 | - | 4594773 - 4596203 | 52469.8 |
| heat repeat domain-containing protein | PLIM_RS18350 | Not Available | - | 4596462 - 4597922 | 53950.5 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS18360 | Not Available | + | 4598540 - 4599895 | 49625.0 |
| s1 rna-binding domain-containing protein | PLIM_RS18365 | Q83E09 | - | 4600313 - 4601986 | 59059.1 |
| site-specific dna-methyltransferase | PLIM_RS18370 | P28638 | + | 4602210 - 4603238 | 38808.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.