Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS18090 | Not Available | + | 4545177 - 4545647 | 17212.2 |
| tetratricopeptide repeat protein | PLIM_RS18095 | Not Available | + | 4545866 - 4546828 | 36333.3 |
| formaldehyde-activating enzyme | PLIM_RS18100 | A0B7U9 | + | 4547136 - 4547645 | 18371.2 |
| hypothetical protein | PLIM_RS18105 | Not Available | - | 4548153 - 4548677 | 19384.4 |
| class i sam-dependent methyltransferase | PLIM_RS18120 | Not Available | + | 4549824 - 4550597 | 29354.7 |
| abi family protein | PLIM_RS18125 | Not Available | + | 4550928 - 4551860 | 36365.9 |
| duf3472 domain-containing protein | PLIM_RS18130 | Not Available | + | 4552157 - 4553470 | 48818.4 |
| hypothetical protein | PLIM_RS18135 | Not Available | - | 4553772 - 4554917 | 41987.6 |
| large-conductance mechanosensitive channel protein mscl | PLIM_RS18140 | Q0HMW6 | - | 4555249 - 4555680 | 15462.2 |
| hypothetical protein | PLIM_RS18150 | Not Available | + | 4556107 - 4556538 | 15875.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.