Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | PLIM_RS18040 | Not Available | - | 4528686 - 4530020 | 50383.7 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS18045 | Not Available | + | 4530223 - 4531527 | 48080.3 |
| hypothetical protein | PLIM_RS18050 | Not Available | - | 4531807 - 4533036 | 44147.3 |
| imp dehydrogenase | PLIM_RS18055 | Q7UJL3 | - | 4532969 - 4534465 | 53640.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | PLIM_RS18060 | Q7UIR4 | - | 4534523 - 4535467 | 34970.1 |
| gfo/idh/moca family protein | PLIM_RS18065 | A8H2K3 | + | 4535979 - 4537244 | 46339.2 |
| heat repeat domain-containing protein | PLIM_RS24820 | Not Available | - | 4537468 - 4538778 | 42795.7 |
| tetratricopeptide repeat protein | PLIM_RS18080 | Not Available | - | 4539914 - 4542877 | 109372.0 |
| hypothetical protein | PLIM_RS18085 | Not Available | - | 4543119 - 4544957 | 67488.8 |
| hypothetical protein | PLIM_RS24255 | Not Available | + | 4544933 - 4545148 | 7967.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.