Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | PLIM_RS17990 | Not Available | - | 4518321 - 4518659 | 12675.3 |
| dihydrodipicolinate synthase family protein | PLIM_RS17995 | Not Available | - | 4518825 - 4519823 | 36720.0 |
| bis(5'-nucleosyl)-tetraphosphatase | PLIM_RS18000 | Not Available | - | 4519890 - 4520348 | 17890.5 |
| superoxide dismutase | PLIM_RS18005 | P28760 | + | 4520977 - 4521594 | 22356.3 |
| (fe-s)-binding protein | PLIM_RS18010 | P94534 | + | 4522080 - 4523471 | 50123.5 |
| sigma-70 family rna polymerase sigma factor | PLIM_RS18015 | Not Available | - | 4523591 - 4524223 | 24632.6 |
| histone deacetylase | PLIM_RS18020 | P28606 | - | 4524352 - 4525287 | 34655.2 |
| sulfatase | PLIM_RS18025 | Not Available | + | 4525460 - 4526980 | 55952.6 |
| hyexafe family protein | PLIM_RS23240 | Not Available | - | 4527279 - 4527932 | 24877.4 |
| histidine phosphatase family protein | PLIM_RS18035 | Not Available | - | 4528001 - 4528498 | 18375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.