Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | PLIM_RS17930 | Not Available | - | 4503817 - 4507236 | 126181.0 |
| marr family winged helix-turn-helix transcriptional regulator | PLIM_RS23230 | Not Available | - | 4507236 - 4507739 | 19381.8 |
| glutamine--trna ligase/yqey domain fusion protein | PLIM_RS17945 | Q7UX42 | + | 4508032 - 4509729 | 64662.9 |
| hypothetical protein | PLIM_RS17950 | Not Available | + | 4509911 - 4511227 | 50228.3 |
| hypothetical protein | PLIM_RS17955 | Not Available | + | 4511230 - 4511613 | 14769.4 |
| hypothetical protein | PLIM_RS17960 | Not Available | + | 4511728 - 4512150 | 16201.2 |
| fmn-binding negative transcriptional regulator | PLIM_RS17965 | Not Available | + | 4512256 - 4512906 | 23929.4 |
| hypothetical protein | PLIM_RS23235 | Not Available | - | 4513131 - 4513595 | 15704.9 |
| duf1559 domain-containing protein | PLIM_RS17975 | Not Available | - | 4513938 - 4515002 | 36919.7 |
| alpha-glucan family phosphorylase | PLIM_RS17985 | Q9YGA7 | + | 4515613 - 4517754 | 80618.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.