Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1015 domain-containing protein | PLIM_RS17815 | Not Available | + | 4479094 - 4480443 | 49264.3 |
| putative toxin-antitoxin system toxin component, pin family | PLIM_RS17820 | Not Available | - | 4480516 - 4481085 | 21460.2 |
| helix-turn-helix domain-containing protein | PLIM_RS17825 | O69717 | - | 4481087 - 4481560 | 17694.6 |
| asparagine--trna ligase | PLIM_RS17835 | P52276 | + | 4481862 - 4483280 | 53368.7 |
| translation elongation factor 4 | PLIM_RS17840 | Q7UX15 | + | 4483628 - 4485433 | 67044.1 |
| sulfatase | PLIM_RS17850 | T2KM04 | + | 4486679 - 4488097 | 52373.5 |
| hypothetical protein | PLIM_RS17855 | Not Available | - | 4488246 - 4488764 | 18808.6 |
| carbon storage regulator | PLIM_RS24815 | Not Available | + | 4489175 - 4489528 | 12461.0 |
| s41 family peptidase | PLIM_RS23220 | Q4L6D0 | + | 4489651 - 4491783 | 78859.8 |
| hypothetical protein | PLIM_RS17870 | Not Available | - | 4491979 - 4492350 | 12039.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.