Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS24875 | Not Available | - | 371228 - 371356 | 4657.72 |
| dihydroorotase | PLIM_RS01480 | Q9HMH9 | + | 371416 - 372744 | 48362.6 |
| dna alkylation repair protein | PLIM_RS01490 | Not Available | + | 373089 - 373793 | 25727.2 |
| metallopeptidase | PLIM_RS01500 | Not Available | - | 374251 - 375015 | 29209.9 |
| aldo/keto reductase | PLIM_RS01505 | O05408 | - | 375271 - 376287 | 37306.7 |
| sdr family nad(p)-dependent oxidoreductase | PLIM_RS01510 | Q8GAV9 | - | 376281 - 377036 | 26548.8 |
| hypothetical protein | PLIM_RS01515 | Not Available | - | 377314 - 377580 | 9762.56 |
| Trna-asn | Not Available | Not Available | + | 377926 - 378001 | Not Available |
| c-type cytochrome domain-containing protein | PLIM_RS01525 | Not Available | - | 378243 - 378599 | 13102.6 |
| hypothetical protein | PLIM_RS24325 | Not Available | - | 378838 - 379755 | 31630.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.