Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| g8 domain-containing protein | PLIM_RS17760 | Q9UHN6 | + | 4463409 - 4465490 | 77001.6 |
| peptide-methionine (s)-s-oxide reductase msra | PLIM_RS17765 | A4SWL6 | - | 4465514 - 4466068 | 20560.2 |
| general secretion pathway protein gspe | PLIM_RS17770 | Not Available | - | 4466258 - 4467286 | 38863.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | PLIM_RS17775 | Q7ULU1 | + | 4467673 - 4468617 | 34833.7 |
| protein kinase domain-containing protein | PLIM_RS23210 | Q9PK92 | + | 4468911 - 4472699 | 138431.0 |
| atp-dependent helicase | PLIM_RS17785 | Not Available | - | 4472755 - 4474857 | 78711.5 |
| thioesterase family protein | PLIM_RS17790 | Not Available | - | 4474940 - 4475380 | 16533.8 |
| hypothetical protein | PLIM_RS17800 | Not Available | + | 4475851 - 4476291 | 16160.1 |
| hypothetical protein | PLIM_RS17805 | Not Available | + | 4476374 - 4477303 | 35278.1 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | PLIM_RS17810 | O66534 | + | 4477785 - 4478990 | 43455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.