Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS17660 | Not Available | + | 4444108 - 4444698 | 22266.8 |
| hypothetical protein | PLIM_RS24250 | Not Available | - | 4444828 - 4445061 | 8596.01 |
| abc transporter atp-binding protein | PLIM_RS17665 | Q7UX73 | - | 4445241 - 4445945 | 25271.4 |
| metalloregulator arsr/smtb family transcription factor | PLIM_RS24800 | P30340 | + | 4446187 - 4446543 | 13197.9 |
| hypothetical protein | PLIM_RS24805 | Not Available | + | 4446572 - 4446916 | 12224.7 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | PLIM_RS17680 | Q7UNN9 | + | 4447100 - 4447975 | 30584.3 |
| efflux rnd transporter periplasmic adaptor subunit | PLIM_RS17685 | Not Available | + | 4448208 - 4449251 | 37965.7 |
| alpha/beta hydrolase | PLIM_RS17690 | Not Available | - | 4449356 - 4450396 | 39293.7 |
| duf1207 domain-containing protein | PLIM_RS23890 | Not Available | - | 4450531 - 4451772 | 45607.1 |
| hypothetical protein | PLIM_RS24600 | Not Available | + | 4451771 - 4452028 | 9512.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.