Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase (glutamine-hydrolyzing) | PLIM_RS17600 | Not Available | - | 4430181 - 4432169 | 73808.6 |
| hypothetical protein | PLIM_RS17605 | Not Available | - | 4432352 - 4434139 | 62256.6 |
| l-2-hydroxyglutarate oxidase | PLIM_RS17610 | S2DJ52 | - | 4434621 - 4435823 | 44357.8 |
| cap domain-containing protein | PLIM_RS17615 | Not Available | - | 4436088 - 4436504 | 14863.0 |
| hypothetical protein | PLIM_RS17620 | Not Available | - | 4436775 - 4438529 | 64550.9 |
| gnat family n-acetyltransferase | PLIM_RS23185 | Not Available | - | 4438681 - 4439196 | 19109.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 4439412 - 4439806 | Not Available |
| carbon storage regulator | PLIM_RS23765 | A3N017 | + | 4440172 - 4440414 | 8512.42 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | PLIM_RS17640 | Not Available | - | 4440744 - 4441508 | 28751.3 |
| bon domain-containing protein | PLIM_RS23195 | Not Available | - | 4441817 - 4443055 | 43469.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.