Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase | PLIM_RS17545 | Q9SNY3 | + | 4418394 - 4419401 | 37560.8 |
| hypothetical protein | PLIM_RS17550 | Not Available | - | 4419404 - 4420111 | 25796.9 |
| imidazoleglycerol-phosphate dehydratase hisb | PLIM_RS17555 | Q7UNC2 | - | 4420502 - 4421101 | 21625.8 |
| histidinol-phosphate transaminase | PLIM_RS17560 | Q7UNC3 | - | 4421258 - 4422334 | 39779.3 |
| hypothetical protein | PLIM_RS17570 | Not Available | + | 4422938 - 4423576 | 23786.0 |
| bon domain-containing protein | PLIM_RS17575 | Not Available | + | 4423925 - 4424692 | 25712.3 |
| lud domain-containing protein | PLIM_RS17580 | Not Available | - | 4424791 - 4425417 | 22702.2 |
| 3'(2'),5'-bisphosphate nucleotidase | PLIM_RS17585 | O94505 | - | 4425477 - 4426502 | 36799.5 |
| sulfatase | PLIM_RS17590 | Q89YS5 | - | 4426682 - 4428262 | 59999.1 |
| rhamnulokinase family protein | PLIM_RS17595 | Q8A1A3 | - | 4428355 - 4429848 | 54948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.