Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | PLIM_RS23180 | Q81WH6 | + | 4400111 - 4404232 | 147077.0 |
| duf1559 domain-containing protein | PLIM_RS17490 | Not Available | + | 4404443 - 4405396 | 34232.3 |
| sugar phosphate isomerase/epimerase | PLIM_RS17495 | Not Available | + | 4405514 - 4406488 | 35670.4 |
| (2fe-2s)-binding protein | PLIM_RS17505 | Not Available | - | 4407080 - 4407604 | 18248.2 |
| nramp family divalent metal transporter | PLIM_RS17510 | Not Available | - | 4407834 - 4409360 | 55576.1 |
| duf1080 domain-containing protein | PLIM_RS17515 | Not Available | - | 4409436 - 4410401 | 34827.4 |
| hypothetical protein | PLIM_RS17520 | Not Available | - | 4410616 - 4411443 | 30839.8 |
| hypothetical protein | PLIM_RS17525 | Not Available | + | 4411783 - 4414401 | 91753.8 |
| hypothetical protein | PLIM_RS17530 | Not Available | + | 4414614 - 4416479 | 74020.6 |
| helix-turn-helix domain-containing protein | PLIM_RS17540 | O87546 | + | 4417177 - 4418238 | 38836.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.