Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS17425 | Not Available | + | 4384143 - 4385363 | 45761.7 |
| type ii secretion system f family protein | PLIM_RS17435 | Not Available | + | 4385442 - 4387025 | 59093.8 |
| hypothetical protein | PLIM_RS17440 | Not Available | + | 4387106 - 4387717 | 22531.0 |
| type ii secretion system protein j | PLIM_RS17445 | Not Available | + | 4387720 - 4388556 | 30637.0 |
| hypothetical protein | PLIM_RS17450 | Not Available | + | 4388553 - 4389020 | 17786.4 |
| duf1559 domain-containing protein | PLIM_RS17455 | Not Available | + | 4389203 - 4390288 | 39525.6 |
| duf3352 domain-containing protein | PLIM_RS17460 | Not Available | + | 4390747 - 4392534 | 63935.0 |
| glycosyltransferase family 39 protein | PLIM_RS17465 | Not Available | + | 4392788 - 4394611 | 67825.5 |
| sulfatase | PLIM_RS17470 | P51688 | + | 4394766 - 4396340 | 58932.8 |
| alpha/beta hydrolase-fold protein | PLIM_RS23175 | Not Available | - | 4396495 - 4399155 | 94898.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.