Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS17365 | Not Available | - | 4372210 - 4372908 | 26338.8 |
| hypothetical protein | PLIM_RS17370 | Not Available | + | 4373290 - 4373865 | 21749.7 |
| glycosyltransferase family 87 protein | PLIM_RS17375 | Not Available | - | 4373998 - 4375299 | 47874.1 |
| lipoyl synthase | PLIM_RS17380 | Q7UH37 | - | 4375408 - 4376274 | 31968.6 |
| lipoyl(octanoyl) transferase lipb | PLIM_RS17385 | Q3SM28 | - | 4376402 - 4377169 | 28204.8 |
| dna gyrase inhibitor yacg | PLIM_RS17390 | Not Available | - | 4377357 - 4377584 | 8823.13 |
| rtcb family protein | PLIM_RS17395 | P46850 | - | 4377762 - 4379150 | 49734.5 |
| apc family permease | PLIM_RS17405 | Not Available | - | 4379628 - 4381076 | 51639.0 |
| gspe/pule family protein | PLIM_RS17415 | Q9I5N9 | + | 4381434 - 4382645 | 44793.4 |
| type ii secretion system f family protein | PLIM_RS17420 | Not Available | + | 4382922 - 4384010 | 39566.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.