Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | PLIM_RS17260 | O07541 | - | 4343206 - 4344069 | 32593.4 |
| nad(p)/fad-dependent oxidoreductase | PLIM_RS17265 | Q05627 | + | 4344216 - 4345826 | 58875.0 |
| flagellin | PLIM_RS17270 | Q56572 | + | 4346570 - 4348720 | 71725.9 |
| rna methyltransferase | PLIM_RS17275 | P74261 | - | 4348917 - 4349774 | 31632.8 |
| adenosyl-hopene transferase hpnh | PLIM_RS17280 | Not Available | - | 4349824 - 4351032 | 44504.4 |
| gephyrin-like molybdotransferase glp | PLIM_RS17285 | Q39054 | - | 4351290 - 4352525 | 43079.3 |
| site-2 protease family protein | PLIM_RS17290 | O67776 | - | 4352736 - 4354781 | 73269.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | PLIM_RS17295 | Q1H145 | - | 4354769 - 4355917 | 41195.3 |
| sodium:proton antiporter | PLIM_RS17300 | Not Available | + | 4356260 - 4357822 | 56096.0 |
| terc family protein | PLIM_RS23165 | P96554 | + | 4358212 - 4359534 | 48290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.