Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS17150 | Not Available | - | 4315607 - 4315915 | 11192.2 |
| Trna-gly | Not Available | Not Available | + | 4316437 - 4316509 | Not Available |
| trigger factor | PLIM_RS17160 | Q7URG5 | + | 4316798 - 4318249 | 54945.9 |
| atp-dependent clp protease proteolytic subunit | PLIM_RS17165 | Q7UK67 | + | 4318651 - 4319301 | 23456.2 |
| atp-dependent clp protease proteolytic subunit | PLIM_RS17170 | Q7UK66 | + | 4319403 - 4320011 | 22378.2 |
| hypothetical protein | PLIM_RS17175 | Not Available | + | 4320194 - 4320985 | 29505.3 |
| duf3050 domain-containing protein | PLIM_RS17180 | Not Available | + | 4321063 - 4321884 | 31000.4 |
| aaa family atpase | PLIM_RS17185 | Not Available | - | 4322060 - 4325203 | 120586.0 |
| dna repair exonuclease-like protein | PLIM_RS17190 | Not Available | - | 4325200 - 4326528 | 48859.9 |
| trna glutamyl-q(34) synthetase gluqrs | PLIM_RS17200 | Q7UHE2 | + | 4326857 - 4327873 | 37544.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.