Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | PLIM_RS17050 | P76091 | + | 4285928 - 4286818 | 31768.3 |
| sugar phosphate isomerase/epimerase | PLIM_RS23150 | Not Available | - | 4287054 - 4287995 | 35811.0 |
| duf3592 domain-containing protein | PLIM_RS17060 | Not Available | - | 4288091 - 4288678 | 21472.2 |
| gtp 3',8-cyclase moaa | PLIM_RS17065 | Q7UT69 | - | 4288704 - 4289705 | 37211.9 |
| ycf48-related protein | PLIM_RS17070 | Not Available | - | 4289770 - 4293132 | 122026.0 |
| hypothetical protein | PLIM_RS17075 | Not Available | - | 4293217 - 4293714 | 17582.7 |
| hypothetical protein | PLIM_RS17080 | Not Available | - | 4293711 - 4294946 | 45025.2 |
| hd domain-containing protein | PLIM_RS17085 | Not Available | - | 4295331 - 4296737 | 53918.3 |
| 3-oxoacyl-acp synthase iii | PLIM_RS17090 | Q8EG66 | - | 4296826 - 4297989 | 42110.2 |
| type i polyketide synthase | PLIM_RS17095 | Not Available | - | 4298124 - 4305038 | 250190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.