Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS16985 | Not Available | + | 4271328 - 4272152 | 29944.0 |
| plp-dependent aspartate aminotransferase family protein | PLIM_RS16990 | Q8RDT4 | - | 4272192 - 4273367 | 42427.0 |
| hypothetical protein | PLIM_RS16995 | Not Available | - | 4273606 - 4274832 | 44712.3 |
| c-type cytochrome | PLIM_RS17000 | Not Available | + | 4275113 - 4277887 | 100628.0 |
| dihydrolipoyl dehydrogenase | PLIM_RS17010 | P31023 | + | 4278112 - 4279500 | 48724.2 |
| hypothetical protein | PLIM_RS17020 | Not Available | + | 4279764 - 4280537 | 27566.3 |
| glycine cleavage system protein h | PLIM_RS17025 | B3DZN7 | + | 4280750 - 4281205 | 16845.0 |
| atp-binding protein | PLIM_RS17030 | Not Available | + | 4281470 - 4282576 | 39733.2 |
| duf4142 domain-containing protein | PLIM_RS17035 | Not Available | - | 4282726 - 4283724 | 36489.7 |
| alpha/beta hydrolase | PLIM_RS17040 | A0A0K2VM55 | - | 4284179 - 4285531 | 50059.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.