Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | PLIM_RS16925 | Not Available | + | 4251975 - 4252643 | 25032.0 |
| hypothetical protein | PLIM_RS16935 | Not Available | + | 4252994 - 4254274 | 45241.7 |
| trna (guanosine(46)-n(7))-methyltransferase trmb | PLIM_RS16940 | Q7UN36 | - | 4254313 - 4254984 | 25839.8 |
| 3-hydroxyacyl-acp dehydratase fabz family protein | PLIM_RS16950 | Q2JTA0 | - | 4255255 - 4255782 | 19736.0 |
| hypothetical protein | PLIM_RS16955 | Not Available | - | 4255874 - 4256806 | 35202.7 |
| duf6528 family protein | PLIM_RS23145 | Not Available | - | 4256925 - 4257983 | 38937.3 |
| rnd family transporter | PLIM_RS16965 | Not Available | + | 4258439 - 4261342 | 105141.0 |
| aspartate--trna ligase | PLIM_RS16970 | Q7UFY6 | - | 4262199 - 4263968 | 66851.3 |
| sulfatase-like hydrolase/transferase | PLIM_RS16975 | Not Available | - | 4264319 - 4266868 | 94032.4 |
| mechanosensitive ion channel domain-containing protein | PLIM_RS16980 | P77338 | - | 4267103 - 4270831 | 137841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.