Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS16875 | Not Available | - | 4239645 - 4240340 | 25993.1 |
| piln domain-containing protein | PLIM_RS16880 | Not Available | - | 4240751 - 4241638 | 32352.3 |
| pilus assembly protein pilm | PLIM_RS16885 | Not Available | - | 4241631 - 4242878 | 46290.1 |
| tfp pilus assembly protein fimt/fimu | PLIM_RS16890 | Not Available | - | 4242894 - 4243457 | 20001.2 |
| hypothetical protein | PLIM_RS16895 | Not Available | - | 4243454 - 4245385 | 69906.2 |
| type ii secretion system protein j | PLIM_RS16900 | Not Available | - | 4245390 - 4246400 | 35999.5 |
| hypothetical protein | PLIM_RS16905 | Not Available | - | 4246381 - 4247013 | 22421.9 |
| abc transporter atp-binding protein | PLIM_RS16910 | Q2LVL0 | + | 4247538 - 4249673 | 79658.2 |
| atpase domain-containing protein | PLIM_RS16915 | Not Available | + | 4249801 - 4250709 | 34068.4 |
| dtdp-4-dehydrorhamnose reductase | PLIM_RS16920 | P9WH08 | - | 4250771 - 4251679 | 32933.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.