Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | PLIM_RS16820 | Q7UTH0 | - | 4224070 - 4224630 | 20808.9 |
| pyruvate kinase | PLIM_RS16825 | Q55863 | - | 4225008 - 4226471 | 52801.1 |
| pas domain s-box protein | PLIM_RS16830 | P26762 | + | 4226878 - 4229925 | 112345.0 |
| rhomboid family intramembrane serine protease | PLIM_RS16835 | A7FNW6 | + | 4229986 - 4231278 | 48810.1 |
| nad+ synthase | PLIM_RS16840 | P74292 | - | 4231557 - 4233221 | 60817.0 |
| 4-hydroxy-tetrahydrodipicolinate reductase | PLIM_RS16845 | Q7UJD7 | - | 4233345 - 4234148 | 27932.5 |
| cupin | PLIM_RS16850 | Not Available | - | 4234206 - 4234565 | 13026.5 |
| trna epoxyqueuosine(34) reductase queg | PLIM_RS16855 | Q9HUL4 | - | 4234622 - 4235863 | 45552.4 |
| secretin and tonb n-terminal domain-containing protein | PLIM_RS16860 | Not Available | - | 4235904 - 4238549 | 95041.0 |
| hypothetical protein | PLIM_RS16865 | Not Available | - | 4238648 - 4239385 | 26416.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.