Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS16715 | Not Available | - | 4204665 - 4205384 | 25610.8 |
| peptidylprolyl isomerase | PLIM_RS16720 | Q9CKP2 | - | 4205643 - 4206086 | 16003.3 |
| endonuclease/exonuclease/phosphatase family protein | PLIM_RS16725 | Not Available | - | 4206424 - 4207185 | 29018.1 |
| nad(p)h-hydrate dehydratase | PLIM_RS16730 | Q2RGI2 | - | 4207189 - 4208121 | 32432.3 |
| basic secretory protein-like protein | PLIM_RS16735 | Not Available | - | 4208195 - 4208869 | 25351.4 |
| cysteine synthase a | PLIM_RS16740 | Q59966 | + | 4209192 - 4210121 | 32619.6 |
| serine hydrolase | PLIM_RS16745 | O05213 | + | 4210155 - 4211447 | 46132.5 |
| hypothetical protein | PLIM_RS16750 | Not Available | + | 4211534 - 4211725 | 6362.94 |
| ykgj family cysteine cluster protein | PLIM_RS16760 | Not Available | + | 4212034 - 4212462 | 16546.8 |
| smi1/knr4 family protein | PLIM_RS16765 | Not Available | + | 4212840 - 4213283 | 16360.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.