Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS16445 | Not Available | - | 4135403 - 4136041 | 24385.7 |
| type ii secretion system protein | PLIM_RS25090 | Not Available | - | 4136560 - 4137093 | 19121.9 |
| hypothetical protein | PLIM_RS24240 | Not Available | - | 4137045 - 4138055 | 38464.0 |
| maue/doxx family redox-associated membrane protein | PLIM_RS16465 | Not Available | - | 4138548 - 4139612 | 38112.7 |
| hydroxymethylbilane synthase | PLIM_RS16470 | Q3A009 | - | 4139814 - 4140770 | 33739.6 |
| comf family protein | PLIM_RS23125 | Not Available | - | 4140897 - 4141721 | 30693.8 |
| hydroxysqualene dehydroxylase hpne | PLIM_RS16480 | Q5NP65 | + | 4141771 - 4143306 | 56365.7 |
| hypothetical protein | PLIM_RS16485 | Not Available | + | 4143526 - 4144035 | 18834.6 |
| sulfatase-like hydrolase/transferase | PLIM_RS16490 | Not Available | - | 4144214 - 4145974 | 64671.9 |
| hypothetical protein | PLIM_RS16495 | Not Available | - | 4146474 - 4147238 | 27541.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.