Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS16390 | Not Available | - | 4125213 - 4125473 | 9436.03 |
| tryptophan synthase subunit alpha | PLIM_RS16395 | P77960 | - | 4125570 - 4126385 | 28336.3 |
| tryptophan synthase subunit beta | PLIM_RS16400 | Q7UKG9 | - | 4126487 - 4127704 | 43899.3 |
| ump kinase | PLIM_RS16405 | Q7UTH1 | - | 4127901 - 4128680 | 27754.8 |
| translation elongation factor ts | PLIM_RS16410 | Q0C1C0 | - | 4128992 - 4129828 | 29960.3 |
| 30s ribosomal protein s2 | PLIM_RS16420 | Q7UKH4 | - | 4130179 - 4130922 | 28505.7 |
| duf1559 domain-containing protein | PLIM_RS16425 | Not Available | - | 4131166 - 4132044 | 32209.5 |
| hypothetical protein | PLIM_RS16430 | Not Available | - | 4132062 - 4133033 | 36587.2 |
| duf1559 domain-containing protein | PLIM_RS16435 | Not Available | - | 4133278 - 4134258 | 35920.0 |
| hypothetical protein | PLIM_RS16440 | Not Available | - | 4134255 - 4135280 | 38687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.