Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6655 family protein | PLIM_RS16340 | Not Available | + | 4115375 - 4116112 | 26210.2 |
| hypothetical protein | PLIM_RS16345 | Not Available | - | 4116244 - 4116918 | 25599.7 |
| sdr family nad(p)-dependent oxidoreductase | PLIM_RS16350 | P80869 | - | 4117032 - 4117814 | 28023.7 |
| hypothetical protein | PLIM_RS16355 | Not Available | + | 4117949 - 4118224 | 9462.36 |
| sulfate/molybdate abc transporter atp-binding protein | PLIM_RS16360 | O31339 | - | 4118408 - 4119469 | 39627.6 |
| sulfate abc transporter permease subunit cysw | PLIM_RS16365 | P0AEB1 | - | 4119544 - 4120413 | 31684.5 |
| sulfate abc transporter permease subunit cyst | PLIM_RS16370 | Q01895 | - | 4120406 - 4121257 | 31119.5 |
| sulfate abc transporter substrate-binding protein | PLIM_RS16375 | P0AG78 | - | 4121391 - 4122449 | 39034.5 |
| rrf2 family transcriptional regulator | PLIM_RS16380 | Not Available | - | 4122515 - 4122985 | 17305.2 |
| amidohydrolase family protein | PLIM_RS23755 | Q58936 | - | 4123163 - 4124959 | 66496.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.