Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate polymerase domain-containing protein | PLIM_RS16285 | Not Available | + | 4102582 - 4103424 | 32145.2 |
| duf4956 domain-containing protein | PLIM_RS16290 | Not Available | + | 4103409 - 4104098 | 25201.8 |
| alpha/beta hydrolase | PLIM_RS16295 | Not Available | + | 4104254 - 4105333 | 38475.8 |
| hypothetical protein | PLIM_RS24235 | Not Available | - | 4105509 - 4105937 | 16548.6 |
| mbl fold metallo-hydrolase | PLIM_RS16310 | P9WLD6 | + | 4106043 - 4106798 | 28099.5 |
| hypothetical protein | PLIM_RS16315 | Not Available | + | 4106989 - 4107660 | 25115.6 |
| j domain-containing protein | PLIM_RS16320 | Not Available | + | 4108208 - 4109311 | 41826.9 |
| hypothetical protein | PLIM_RS24450 | Not Available | + | 4109339 - 4109524 | 6992.87 |
| vitamin b12-dependent ribonucleotide reductase | PLIM_RS16330 | Q7UI46 | - | 4110124 - 4113132 | 110195.0 |
| hypothetical protein | PLIM_RS16335 | Not Available | + | 4114274 - 4115275 | 36541.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.