Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | PLIM_RS16235 | P19405 | - | 4087715 - 4089430 | 62311.1 |
| hypothetical protein | PLIM_RS16240 | Not Available | - | 4089766 - 4089957 | 7259.4 |
| tm2 domain-containing protein | PLIM_RS23120 | Not Available | - | 4090092 - 4091063 | 34430.1 |
| duf6263 family protein | PLIM_RS16250 | Not Available | + | 4091428 - 4092399 | 34689.9 |
| slyx family protein | PLIM_RS16255 | Not Available | - | 4092636 - 4092854 | 8138.8 |
| abc transporter permease | PLIM_RS16260 | Not Available | - | 4092946 - 4094310 | 49341.5 |
| abc transporter permease | PLIM_RS16265 | Not Available | - | 4094383 - 4095651 | 46733.6 |
| abc transporter atp-binding protein | PLIM_RS16270 | Q0A8P9 | - | 4095845 - 4096567 | 26193.8 |
| family 16 glycoside hydrolase | PLIM_RS16275 | Not Available | + | 4097041 - 4100043 | 109146.0 |
| coth kinase family protein | PLIM_RS16280 | Not Available | + | 4100328 - 4102322 | 71116.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.