Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | PLIM_RS16010 | Q6M1A3 | - | 4037357 - 4038583 | 47006.9 |
| peptidylprolyl isomerase | PLIM_RS16015 | P0AFL5 | - | 4038755 - 4039525 | 27994.1 |
| beta-ketoacyl-acp synthase ii | PLIM_RS16020 | O34340 | - | 4039641 - 4040930 | 46083.5 |
| 3-hydroxyacyl-acp dehydratase fabz family protein | PLIM_RS16025 | Q7TV98 | - | 4041146 - 4041634 | 17763.3 |
| acyl carrier protein | PLIM_RS16030 | Q9WZD0 | - | 4041811 - 4042197 | 14033.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | PLIM_RS16035 | P73574 | - | 4042396 - 4043151 | 26490.0 |
| 3-hydroxyacyl-acp dehydratase fabz family protein | PLIM_RS16040 | Q38XF8 | - | 4043312 - 4043815 | 18341.0 |
| hypothetical protein | PLIM_RS16045 | Not Available | - | 4044147 - 4045670 | 55590.8 |
| hypothetical protein | PLIM_RS16050 | Not Available | - | 4045722 - 4047338 | 58821.0 |
| hypothetical protein | PLIM_RS23105 | Not Available | - | 4047384 - 4049648 | 82027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.