Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tlpa disulfide reductase family protein | PLIM_RS23920 | Not Available | - | 4024729 - 4025877 | 42277.8 |
| hypothetical protein | PLIM_RS24445 | Not Available | - | 4026094 - 4026267 | 6528.85 |
| duf1559 domain-containing protein | PLIM_RS15965 | Not Available | - | 4026329 - 4027357 | 37083.3 |
| helix-turn-helix domain-containing protein | PLIM_RS23095 | G3XCU2 | + | 4028016 - 4028960 | 35489.4 |
| hypothetical protein | PLIM_RS15975 | Not Available | - | 4029113 - 4030279 | 43332.4 |
| amino acid-binding act protein | PLIM_RS15980 | Not Available | - | 4030276 - 4030689 | 14585.6 |
| hypothetical protein | PLIM_RS23100 | Not Available | + | 4031011 - 4033884 | 107309.0 |
| hypothetical protein | PLIM_RS15995 | Not Available | - | 4033892 - 4034965 | 40242.1 |
| nad(p)/fad-dependent oxidoreductase | PLIM_RS16000 | Q4KCZ0 | - | 4035211 - 4036464 | 46800.8 |
| nudix domain-containing protein | PLIM_RS16005 | Q5YYB6 | + | 4036782 - 4037318 | 20062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.