Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS15865 | Not Available | - | 4003500 - 4004057 | 21612.1 |
| hypothetical protein | PLIM_RS24225 | Not Available | + | 4004288 - 4004512 | 8756.43 |
| helix-turn-helix domain-containing protein | PLIM_RS15870 | Not Available | + | 4004689 - 4004901 | 7890.57 |
| tyrosine-type recombinase/integrase | PLIM_RS23750 | Not Available | + | 4005377 - 4006696 | 49323.6 |
| Trna-gln | Not Available | Not Available | + | 4006669 - 4006742 | Not Available |
| carboxypeptidase-like regulatory domain-containing protein | PLIM_RS15885 | Not Available | - | 4006975 - 4007634 | 22165.6 |
| hypothetical protein | PLIM_RS15890 | Not Available | + | 4008269 - 4009918 | 59630.1 |
| flagellar motor switch protein flig | PLIM_RS15895 | Q9WY63 | + | 4009978 - 4010970 | 36514.0 |
| flih/sctl family protein | PLIM_RS15900 | Not Available | + | 4011047 - 4011814 | 27845.1 |
| flii/yscn family atpase | PLIM_RS15905 | P23445 | + | 4011811 - 4013142 | 47751.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.