Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| brex system p-loop protein brxc | PLIM_RS15820 | P0DUF2 | - | 3989938 - 3993564 | 136601.0 |
| duf1788 domain-containing protein | PLIM_RS15825 | Not Available | - | 3993582 - 3994217 | 24281.2 |
| brxa family protein | PLIM_RS15830 | Not Available | - | 3994214 - 3994996 | 30605.4 |
| brex-6 system brxe protein | PLIM_RS15835 | Not Available | - | 3994996 - 3995634 | 24263.3 |
| transposase | PLIM_RS23085 | Not Available | - | 3995733 - 3996041 | 11399.2 |
| dmt family protein | PLIM_RS25080 | Not Available | - | 3996048 - 3996113 | 2204.78 |
| hypothetical protein | PLIM_RS25085 | Not Available | + | 3996187 - 3996345 | 5716.84 |
| dna polymerase | PLIM_RS15845 | P19821 | - | 3997105 - 3998835 | 63622.1 |
| duf927 domain-containing protein | PLIM_RS15855 | Not Available | - | 3999600 - 4001621 | 75326.1 |
| hypothetical protein | PLIM_RS15860 | Not Available | - | 4002376 - 4003383 | 38358.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.