Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS24780 | Not Available | - | 3975404 - 3975784 | 14096.2 |
| dmt family protein | PLIM_RS25070 | Not Available | - | 3976064 - 3976219 | 5803.92 |
| hypothetical protein | PLIM_RS15780 | Not Available | - | 3976259 - 3976999 | 27775.1 |
| duf4339 domain-containing protein | PLIM_RS15785 | Not Available | - | 3977009 - 3977845 | 30171.8 |
| transposase | PLIM_RS25075 | Not Available | - | 3978447 - 3978638 | 7604.46 |
| transposase | PLIM_RS23745 | Not Available | - | 3978893 - 3979060 | 6173.44 |
| dead/deah box helicase | PLIM_RS15800 | O27830 | - | 3979304 - 3981424 | 78718.7 |
| brex system atp-binding protein brxd | PLIM_RS15805 | Not Available | - | 3981418 - 3982740 | 48711.8 |
| brex-6 system phosphatase pglz | PLIM_RS15810 | Not Available | - | 3982737 - 3985652 | 108261.0 |
| brex-6 system adenine-specific dna-methyltransferase pglx | PLIM_RS15815 | P0DQP1 | - | 3985649 - 3989926 | 160921.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.